e.g. 1:1246..9423
SNP Detail For snp_cf0001000625579    [See in GBrowse]
1.General Information
SNP ID: snp_cf0001000625579
Organism: Canis familiaris
Individual: solidGW1
Create time: 2014-08-01
Last update: 2014-08-01
2.Allele Information
Platform: SOLiD
Method: sequence
SNP Class: snp
Genotype: A
5'flank: AATAATGATCCCTGAGCCGAAGGGGAAGGA
3'flank: ATAGTGAGCCTGCTGGAAAGGAACATCACG
3.Reference Map information
Chrom Position Reference solidGW1
Chr19 1956539 G A
4.Gene information
Gene model(s)
Gene ID Position in Gene Strands Gene Allele Location
ENSCAFG00000028804 139338 + G CDS
Transcript Protein
SNP to transcript Accession Position in Transcript Allele change Accession Position in Protein Residue change
+ ENSCAFT00000044982 366 GAG => GAA ENSCAFP00000038311 122 E => E
+ ENSCAFT00000043654 261 GAG => GAA ENSCAFP00000035985 87 E => E
5.SNPs of other individuals in this position
SNP_ID Individual Genotype 5' Near Seq 30 bp 3' Near Seq 30 bp Create time Last update time
snp_cf0055001788975 LUPWCHN00001 R AATAATGATCCCTGAGCCGAAGGGGAAGGA ATAGTGAGCCTGCTGGAAAGGAACATCACG 2014-07-19 2014-07-19
6.Fasta Information
GGCGTAGAAG ACATCGTGGC AATAATGATC CCTGAGCCGA AGGGGAAGGA
A
ATAGTGAGCC TGCTGGAAAG GAACATCACG GTGACGATGT ACATCACCAT