SNP Detail For
snp_cf0019001305493
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1.General Information
SNP ID: | snp_cf0019001305493 |
---|---|
Organism: | Canis familiaris |
Individual: | FAMBGSD00001 |
Create time: | 2014-07-19 |
Last update: | 2014-07-19 |
2.Allele Information
Platform: | SOLEXA |
---|---|
Method: | sequence |
SNP Class: | snp |
Genotype: | Y |
5'flank: | TGGAAAAGAATAGAATCGAATTGAATGGAA |
3'flank: | CGAATCGAAAAGAATCGAATCGAATAGAAT |
3.Reference Map information
Chrom | Position | Reference | FAMBGSD00001 |
---|---|---|---|
Chr20 | 1562 | T | Y |
4.Gene information
Gene model(s) | ||||||
---|---|---|---|---|---|---|
Gene ID | Position in Gene | Strands | Gene Allele | Location | ||
NA | NA | NA | NA | NA | ||
Transcript | Protein | |||||
SNP to transcript | Accession | Position in Transcript | Allele change | Accession | Position in Protein | Residue change |
NA | NA | NA | NA | NA | NA | NA |
5.SNPs of other individuals in this position
SNP_ID | Individual | Genotype | 5' Near Seq 30 bp | 3' Near Seq 30 bp | Create time | Last update time |
---|---|---|---|---|---|---|
snp_cf0051001698914 | LJ6 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0038001351949 | KM3 | C | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0078001745823 | YJ9 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0041001725165 | KM6 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0025001331539 | GS1 | C | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0018001438699 | FAMBBEM00001 | C | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0071001742497 | YJ2 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0031001336090 | GS7 | C | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0052001666814 | LJ7 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0033001343400 | GS9 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0077001733769 | YJ8 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0028001275184 | GS4 | C | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0024001360240 | GS10 | C | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0035001656973 | KM10 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0042001786569 | KM7 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0039001410942 | KM4 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0030001325395 | GS6 | C | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0040001516401 | KM5 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0027001339376 | GS3 | C | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0026001313206 | GS2 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0032001311244 | GS8 | C | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
snp_cf0029001230365 | GS5 | Y | TGGAAAAGAATAGAATCGAATTGAATGGAA | CGAATCGAAAAGAATCGAATCGAATAGAAT | 2014-07-19 | 2014-07-19 |
6.Fasta Information
TCAAATCGTA | TCGAATCGAA | TGGAAAAGAA | TAGAATCGAA | TTGAATGGAA |
Y | ||||
CGAATCGAAA | AGAATCGAAT | CGAATAGAAT | AGAATCGAAT | AGAATAGAAA |