SNP Detail For
snp_cf0070000000010
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1.General Information
SNP ID: | snp_cf0070000000010 |
---|---|
Organism: | Canis familiaris |
Individual: | YJ1 |
Create time: | 2014-07-19 |
Last update: | 2014-07-19 |
2.Allele Information
Platform: | SOLEXA |
---|---|
Method: | sequence |
SNP Class: | snp |
Genotype: | Y |
5'flank: | TGTATCTGAGATGAATACACTGTTTTCCAA |
3'flank: | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT |
3.Reference Map information
Chrom | Position | Reference | YJ1 |
---|---|---|---|
Chr1 | 30515 | C | Y |
4.Gene information
Gene model(s) | ||||||
---|---|---|---|---|---|---|
Gene ID | Position in Gene | Strands | Gene Allele | Location | ||
NA | NA | NA | NA | NA | ||
Transcript | Protein | |||||
SNP to transcript | Accession | Position in Transcript | Allele change | Accession | Position in Protein | Residue change |
NA | NA | NA | NA | NA | NA | NA |
5.SNPs of other individuals in this position
SNP_ID | Individual | Genotype | 5' Near Seq 30 bp | 3' Near Seq 30 bp | Create time | Last update time |
---|---|---|---|---|---|---|
snp_cf0042000000009 | KM7 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0019000000007 | FAMBGSD00001 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0006000000010 | CRW | T | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0029000000005 | GS5 | T | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0040000000009 | KM5 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0057000000009 | LUPWRUS00002 | T | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0058000000013 | LUPWRUS00003 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0032000000006 | GS8 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0026000000006 | GS2 | T | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0041000000006 | KM6 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0031000000008 | GS7 | T | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0050000000014 | LJ5 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0027000000009 | GS3 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0033000000004 | GS9 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0025000000007 | GS1 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0021000000010 | FAMICHN00001 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0028000000004 | GS4 | T | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0048000000010 | LJ3 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0024000000007 | GS10 | T | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
snp_cf0030000000004 | GS6 | Y | TGTATCTGAGATGAATACACTGTTTTCCAA | GGTCTTCTTCAATCAGAGTGTAGCTAGGTT | 2014-07-19 | 2014-07-19 |
6.Fasta Information
CTATTGAGCC | TGAACTCACG | TGTATCTGAG | ATGAATACAC | TGTTTTCCAA |
Y | ||||
GGTCTTCTTC | AATCAGAGTG | TAGCTAGGTT | CCTACTCCCA | TGTACTAGTG |